A proton nuclear magnetic resonance assignment and secondary structure determination of recombinant human thioredoxin.
نویسندگان
چکیده
Two-dimensional 1H NMR spectroscopy has been applied to a structural analysis of the reduced form of a recombinant human thioredoxin, a ubiquitous dithiol oxidoreductase recently isolated from an immunocompetent lymphoblastoid cell line. The sequential assignment of the spectrum, including all proline residues, has been accomplished by using experiments to demonstrate through-bond and through-space connectivities. The secondary structure has been determined by a qualitative interpretation of nuclear Overhauser effects, NH exchange data, and 3JHN alpha coupling constants. The secondary structure was found to be similar to that of the X-ray structure of Escherichia coli thioredoxin, consisting of a mixed five-stranded beta-sheet surrounded by four alpha-helices. The assignment and structural characterization of human thioredoxin was facilitated by the increased resolution and sensitivity afforded by a magnetic field strength of 600 MHz and required the use of two temperatures and two pH conditions to resolve ambiguities caused by a duplication of resonances. This duplication, extending from Phe-41 to Val-59, and including Lys-3-Ile-5, Val-24, Val-25, Asn-39, and Ile-101-Glu-103, appears to be due to heterogeneity arising from the presence or absence of the N-terminal methionine.
منابع مشابه
Proton nuclear magnetic resonance assignments and secondary structure determination of the ColE1 rop (rom) protein.
The complete resonance assignment of the ColE1 rop (rom) protein at pH 2.3 was obtained by two-dimensional (2D) proton nuclear magnetic resonance spectroscopy (1H NMR) at 500 and 600 MHz using through-bond and through-space connectivities. Sequential assignments and elements of regular secondary structure were deduced by analysis of nuclear Overhauser enhancement spectroscopy (NOESY) experiment...
متن کاملNMR structure determination for larger proteins using backbone-only data.
Conventional protein structure determination from nuclear magnetic resonance data relies heavily on side-chain proton-to-proton distances. The necessary side-chain resonance assignment, however, is labor intensive and prone to error. Here we show that structures can be accurately determined without nuclear magnetic resonance (NMR) information on the side chains for proteins up to 25 kilodaltons...
متن کاملNUCLEAR MAGNETIC RESONANCE STUDY OF THE STRUCTURE OF GLYOXALDIHYDRAZONE
Study of the nuclear magnetic resonance spectra of glyoxaldihydrazone in dimethylsulfoxide and deuterochlorofonn leads to the conclusion that this compound exists predominantly in non-chelate structure
متن کاملAutomated NMR Assignment and Protein Structure Determination using Sparse Dipolar Coupling Constraints.
0079-6565/$ see front matter Published by Elsevier doi:10.1016/j.pnmrs.2008.12.001 Abbreviations: NMR, Nuclear Magnetic Resonan RMSD, mean square deviation; HSQC, heteronuclea spectroscopy; NOE, Nuclear Overhauser Effect; RDC, re Protein Data Bank; pol g, zinc finger domain of the hu CH, C Ha; hSRI, human Set2-Rpb1 interacting do human transcription elongation factor CA150 (RN domain interactin...
متن کامل1H and 15N resonance assignments and secondary structure of the human thioredoxin C62A, C69A, C73A mutant.
The complete assignment of 1H and 15N backbone resonances and near-complete 1H side-chain resonance assignments have been obtained for the reduced form of a mutant of human thioredoxin (105 residues) in which the three non-active site cysteines have been substituted by alanines: C62A, C69A, C73A. The assignments were made primarily on the basis of three-dimensional 15N-separated nuclear Overhau...
متن کاملذخیره در منابع من
با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید
عنوان ژورنال:
- Biochemistry
دوره 28 17 شماره
صفحات -
تاریخ انتشار 1989